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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924540.1_cds_XP_016472873.1_65060
CDS Infomation

[gene=LOC107794849] [db_xref=GeneID:107794849] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016472873.1] [location=join(20516..20735,21175..21379,22012..22102,22200..22345,22625..22868,22962..23066,23236..23418,23575..23779,24603..25087)] [gbkey=CDS]
Sequence

ATGGGGAAATTTGCAGTAACAATGATGAGTTTTCTGCTGTTGTTCTCGTGTGTTGTTTTT
TCTGAAGCAGTAGACATGAAGTACAAGGACCCAAAACAGCCACTGAATGTTAGAATAAGG
GATTTAATGAACAGAATGAGTCTTGAAGAGAAAATTGGTCAGATGACCCAGATTGAAAGA
CATGTTGCTGCACCTGAGATCATGAAGAAATACTTCATTGGGAGTGTACTGAGTGGTGGA
GGAAGTGCACCAGTGCCTAAGGCTACTGCTGCGGACTGGGTAAGGATGGTTAATGAGATT
CAGAAGGGTTCTCTTTCAACACGCCTTGGTATTCCCATGATTTATGGAATTGATGCAGTC
CATGGGCACAACAATGTCTACAAAGCTACAATTTTTCCACACAATGTTGGCCTTGGAGTC
ACAAGAGACCCGCAGCTTGTGAAGCGGATTGGGGCTGCGACTGCCCTTGAAGTCAGAGCC
ACAGGGATCCCTTATACTTTTGCACCATGCATCGCAGTCTGTAGAGATCCAAGATGGGGT
CGGTGCTACGAAAGCTACAGTGAAGACCATAGAATTGTTCGAGCAATGACTGAGATCATT
CCTGGTTTACAAGGAGATATTCCAGCTAACTCCCGTAAGGGTGTTCCTTTTGTCGCAGGA
AAGACTAAAGTAGCAGCCTGTGCTAAGCACTTTGTGGGCGATGGTGGCACTGACAAGGGC
ATTGATGAAAATAACACTGTTATCAATGTGAATGGGCTAATCAACATCCACATGCCTGCC
TATATTGATTCCATTGTAAAGGGAGTTTCGACAATAATGGTATCTTACTCAAGCTGGAAT
GGCATGAAGATGCATGCTAACCGTGGTCTAATCACTGGCTTTCTCAAGGGAAAGCTCAAG
TTTAGGGGCTTTGTCATTTCAGATTGGGAGGCTATAGACAAGATCACTGATCCACCCCGT
GCCAATTACTCTTACTCTATTCAGGCTGGAGTTCTTGCTGGAATTGACATGATTATGGGT
CAGGAAAACTTGACCGAATTTCTTGATGATCTGGCTTTCCAAGTCAGGAACAATATCATT
CCCATGAGCAGGATTGACGATGCAGTTAAAAGAATATTAAGGGTTAAATTTGTCATGGGT
CTCTTTGAGAACCCATTGGCTGATCTCAGCTTAGCGAACCAACTGGGAAGCCAGGAACAC
GGAGGATTAGCAAGAGAAGCAGTGAGGAAATCGCTTGTACTTTTGAAGAATGGAAAAGTT
ATTAGCCAGCCACTACTTCCTCTTCCAAAAAAAGTGGCGAAGATACTTGTGGCTGGCAGT
CACGCTGACAATTTGGGTTACCAGTGCGGAGGCTGGACTATAGGGTGGCAGGGAATTGGA
GGCAACGATCTTACCACAGGAACCACAATCTTATCTGCTGTGAAAAACACAGTCCATCCA
TCTACGCAAGTCGTCTACCAGGACAACCCAGATGCAAACTTTGTAAAGTCCAGCCATTTT
TCGTATGCCATTGTTGTCGTGGGTGAGACACCCTATGCGGAGATGTTTGGTGATAGTGCA
AAACTTGCTATAGCTGAACCTGGTCCGAGTACCATCACTAACGTCTGTGGGGTCGTGAAA
TGTGTGGTAGTTGTCATGTCGGGGCGTCCAGTTGTGATTGAGCCGTATCTTGCAAATATA
GACGCCCTCGTAGCTGCATGGCTTCCGGGAAGTGAAGGCCAAGGTGTCGCTGATGTCTTA
TTTGGTGACTATGGATTCACAGGAAAACTTGCGCGCACTTGGTTCAAGTCAGTTGACCAG
CTTCCCATGAATGTTGGCGATCCGCATTATGATCCTCTATTTCCCTTTGGATTTGGTCTC
ACAACTGAGCCTGTCCAGAACTAA

Peptide Sequence

PEP ID

XP_016472873.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MGKFAVTMMSFLLLFSCVVFSEAVDMKYKDPKQPLNVRIRDLMNRMSLEEKIGQMTQIER
HVAAPEIMKKYFIGSVLSGGGSAPVPKATAADWVRMVNEIQKGSLSTRLGIPMIYGIDAV
HGHNNVYKATIFPHNVGLGVTRDPQLVKRIGAATALEVRATGIPYTFAPCIAVCRDPRWG
RCYESYSEDHRIVRAMTEIIPGLQGDIPANSRKGVPFVAGKTKVAACAKHFVGDGGTDKG
IDENNTVINVNGLINIHMPAYIDSIVKGVSTIMVSYSSWNGMKMHANRGLITGFLKGKLK
FRGFVISDWEAIDKITDPPRANYSYSIQAGVLAGIDMIMGQENLTEFLDDLAFQVRNNII
PMSRIDDAVKRILRVKFVMGLFENPLADLSLANQLGSQEHGGLAREAVRKSLVLLKNGKV
ISQPLLPLPKKVAKILVAGSHADNLGYQCGGWTIGWQGIGGNDLTTGTTILSAVKNTVHP
STQVVYQDNPDANFVKSSHFSYAIVVVGETPYAEMFGDSAKLAIAEPGPSTITNVCGVVK
CVVVVMSGRPVVIEPYLANIDALVAAWLPGSEGQGVADVLFGDYGFTGKLARTWFKSVDQ
LPMNVGDPHYDPLFPFGFGLTTEPVQN

Transcript Sequence

Gene sequence data has not been registered.